I have a set of scripts (available on github) that I use to generate whole-program LLVM bitcode files. They are used as drop-in replacements for gcc that compile code twice: once to a normal object file and once to a bitcode file. Ideally, these scripts can be substituted in via environment variables in the typical fashion:

CC=wllvm CFLAGS="-O0 -g" ./configure
make
make install

Until now, this worked for many libraries, but often ran into trouble with some libraries that used libtool in their build processes. The libtool script would die with a syntax error some time into the build. After tracing the configure script, it was apparent that a configure check was failing and then continuing after setting its variable to something invalid. The check was determining how to parse the output of nm; when it failed, part of the parsing pipeline was left empty and became a syntax error.

Annoying.

I eventually figured out that my scripts were improperly trying to attach an LLVM bitcode file to an executable during the configure process, causing this critical check to fail. Preventing the scripts from attaching bitcode directly to binaries avoids this problem. No significant functionality is lost, since multi-file executables are nearly always linked together separately from the compilation of individual files.